苔草属植物遗传多样性研究进展

doi:10.11733/j.issn.1007-0435.2021.06.003

草地学报 ›› 2021, Vol. 29 ›› Issue (6): 1148-1157.DOI: 10.11733/j.issn.1007-0435.2021.06.003

苔草属植物遗传多样性研究进展

刘凌云^1,2, 范希峰², 滕珂², 岳跃森², 常智慧¹, 武菊英²

1. 北京林业大学草业与草原学院, 北京 100083;
2. 北京市农林科学院北京草业与环境研究发展中心, 北京 100097

收稿日期:2020-11-16 修回日期:2020-12-10 出版日期:2021-06-15 发布日期:2021-07-05
通讯作者: 常智慧,E-mail:changzh@bjfu.edu.cn;武菊英,E-mail:wujuying@grass-env.com
作者简介:刘凌云(1995-)，汉族，女，山东潍坊人，博士研究生，主要从事草坪、观赏草分子生物学研究，E-mail:liulingyun01@163.com
基金资助:
北京市自然科学青年基金（6204039）；国家自然科学基金（31901397，31971770）；北京市农林科学院科技创新能力建设专项（KJCX20210431）共同资助

Advances in Development of Genetic Diversity of Carex L.

LIU Ling-yun^1,2, FAN Xi-feng², TENG Ke², YUE Yue-sen², CHANG Zhi-hui¹, WU Ju-ying²

1. College of Grassland Science, Beijing Forestry University, Beijing 100083, China;
2. Beijing Research and Development Center for Grass and Environment, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China

Received:2020-11-16 Revised:2020-12-10 Online:2021-06-15 Published:2021-07-05

摘要/Abstract

摘要： 苔草（Carex）为莎草科（Cyperaceae）苔草属（Carex L.）的多年生草本植物，具有耐荫、自繁能力强、多年生、种质资源丰富等特点，在园林绿化、草牧业生产、生态修复等方面发挥着越来越重要的作用。随着苔草属植物的广泛应用，种质资源进一步开发和新品种选育成为当前的重点，而遗传多样性研究是基础。本文综述了苔草属植物在形态、细胞及分子水平的遗传多样性研究进展。此外，还介绍了苔草属植物遗传多样性研究在新品种选育、品种鉴定、物种起源及亲缘关系、遗传图谱构建等方面的应用。最后对苔草属植物基因组开发、新品种培育进行展望，以期为今后苔草的遗传育种及进一步开发应用奠定基础。

关键词: 苔草, 遗传特性, 形态水平, 细胞水平, 分子水平, 遗传多样性

Abstract: Carex L. was a perennial herbaceous plant of the Cyperaceae family,characterized with strong shade tolerance,strong self-reproduction ability,perennation and abundant germplasm resources.Carex plants were playing an increasingly important role in landscaping,grass husbandry production,ecological restoration and other aspects. With the wide application of Carex,further exploring germplasm resources and breeding new cultivars has become the major objective,whereas genetic diversity studies are the basis. In this study,the progress of Carex genetic diversity researches at the morphological,cellular and molecular levels were described. Moreover,the application of genetic diversity analysis in cultivar breeding,germplasm classification,origin and phylogenetic relationship of species and genetic map construction were introduced. In the end,the prospect of genome development and new variety breeding of Carex were discussed to lay a foundation for studies on genetic breeding and further development and application in future.

Key words: Carex L., Genetic Characteristics, Morphological Level, Cellular Level, Molecular Level, Genetic Diversity

中图分类号:

Q344+.4

刘凌云, 范希峰, 滕珂, 岳跃森, 常智慧, 武菊英. 苔草属植物遗传多样性研究进展[J]. 草地学报, 2021, 29(6): 1148-1157.

LIU Ling-yun, FAN Xi-feng, TENG Ke, YUE Yue-sen, CHANG Zhi-hui, WU Ju-ying. Advances in Development of Genetic Diversity of Carex L.[J]. Acta Agrestia Sinica, 2021, 29(6): 1148-1157.

0
/ / 推荐

导出引用管理器 EndNote|Ris|BibTeX

链接本文: https://manu40.magtech.com.cn/Jweb_cdxb/CN/10.11733/j.issn.1007-0435.2021.06.003

https://manu40.magtech.com.cn/Jweb_cdxb/CN/Y2021/V29/I6/1148

参考文献

[1] Teng K,Teng W J,Wen H F,et al. PacBio single-molecule long-read sequencing shed new light on the complexity of the Carex breviculmis transcriptome[J]. BMC Genomics,2019,20(1):158-164
[2] Lipnerova I,Bures P,Horova L,et al. Evolution of genome size in Carex (Cyperaceae) in relation to chromosome number and genomic base compositio[J]. Annals of Botany,2013,111(1):79-94
[3] Group G C.Making Carex monophyletic (Cyperaceae,tribe Cariceae):a new broader circumscription[J]. Botanical Journal of the Linnean Society,2015,179(1):1-42
[4] Starr J R,Naczi R F,Chouinard B N. Plant DNA barcodes and species resolution in sedges (Carex,Cyperaceae)[J]. Molecular Ecology Resources,2010,9(s1):151-163
[5] Starr J R,Ford B A. Phylogeny and evolution in Cariceae (Cyperaceae):current knowledge and future directions[J]. The Botanical Review,2008,75(1):110-137
[6] 卢崇恩,赵文恩,张佐. 五台山苔草的饲用价值[J]. 草与畜杂志,1995(3):7-9
[7] 袁晓颖,苏含英. 野生牧草资源-河沙苔草的研究[J]. 东北林业大学学报,1992,20(4):98-101
[8] 周强. 老芒麦EST-SSR分子标记开发与遗传多样性分析[D]. 兰州:兰州大学,2016:15-16
[9] 郑轶琦. 假俭草种质遗传多样性分析、遗传图谱构建及重要性状QTL定位[D]. 南京:南京农业大学,2009:35-46
[10] M Pedersen A T,Nowak M D,Brysting A K,et al. Hybrid origins of Carex rostrata var. borealis and C.stenolepis,two problematic taxa in Carex section Vesicariae (Cyperaceae)[J]. Plos One,2017,11(10):1
[11] Gillespie E L,Pauley A G,Haffner M L,et al. Fourteen polymorphic microsatellite markers for a widespread limestone endemic,Carex eburnea (Cyperaceae:Carex sect. Albae)[J]. Applications in Plant Sciences,2017,5(8):1700031
[12] Reznicek A A. Evolution in sedges (Carex,Cyperaceae)[J]. Canadian Journal of Botany,1990,68(7):1409-1432
[13] 冷建红,楼炉焕,魏琦,等. 薹草属植物研究进展及园林应用前景研究[J]. 北方园艺,2011(6):196-201
[14] Wang Y,Yang H,Li X,et al. Carex jianfengensis (Carex sect. Rhomboidales,Cyperaceae),a New Species from Hainan,China[J]. Plos One,2015,10(9):e0136373
[15] Naczi R F C. Carex pigra,a new species of carex section Griseae (Cyperaceae) from the southeastern united states of America[J]. Novon A Journal for Botanical Nomenclature,1997,7(1):67-71
[16] Liu W S,Zhou Y,Liao H,et al. Microsatellite primers in Carex moorcroftii (Cyperaceae),a dominant species of the steppe on the Qinghai-Tibetan Plateau[J]. American Journal of Botany,2011,98(12):382-384
[17] Ángel,Pintos,Pablo,et al. Six new species of Arthrinium from Europe and notes about A. caricicola and other species found in Carex spp. hosts[J]. MycoKeys,2019,49:15-48
[18] 李国平,杨鹭生. 蕨状苔草新变型-银边蕨状苔[J]. 福建林业科技,2019,46(4):58-59
[19] Kim C,Jung J,Choi H-K. Molecular identification of Schoenoplectiella species (Cyperaceae) by use of microsatellite markers[J]. Plant Systematics and Evolution,2012,298(4):811-817
[20] Shekhovtsov S V,Shekhovtsova I N,Peltek S E. Phylogeny of Siberian species of Carex sect. Vesicariae based on nuclear and plastid markers[J]. Nordic Journal of Botany,2012,30(3):343-351
[21] Léveillé-Bourret É,Starr J R,Ford B A. Why are there so many sedges? Sumatroscirpeae,a missing piece in the evolutionary puzzle of the giant genus Carex (Cyperaceae)[J]. Molecular Phylogenetics and Evolution,2018,119:93-104
[22] 庞莉莉,李玉双,陈洁,等. 江苏野生苔草属植物资源调查与多样性分析[J]. 东北林业大学学报,2015(5):75-79
[23] Yu F H,Kruesi B O,Schneller J J,et al. Positive correlation between vegetation dissimilarity and genetic differentiation of Carex sempervirens[J]. Flora-Morphology,Distribution,Functional Ecology of Plants,2009,204(9):651-657
[24] 梁芳,白淑媛,董爱香,等. 18种苔草属植物种子生物学特性的比较[J]. 草业科学,2011,28(10):1825-1830
[25] 何池全,赵魁义. 毛果苔草种群地上生物量与株长或鞘高分形特征[J]. 应用生态学报,2003(4):161-163
[26] 张咏梅,白小明,田彥锋,等. 4种观赏草叶片解剖结构的观察及其对环境的适应性分析[J]. 草地学报,2019,27(5):1377-1383
[27] 丁雪珍. 山东苔草属植物叶表皮微形态的研究[D]. 济南:山东师范大学,2008:5-15
[28] 罗弦,潘远智,杨学军,等. 6种北京山区野生苔草种子生物学特性的比较[J].安徽农业科学,2009,37(9):4184-4186
[29] 梁芳,董爱香. 北京地区苔草属植物资源调查、综合性状评价及园林应用[J]. 园林科技,2015(2):1-6
[30] 梁芳,董爱香,郑云峰,等. 20种苔草形态学和生殖生物学特性研究[C]//北京市科学技术协会、北京市园林绿化局、北京市公园管理中心、北京园林学会.北京园林绿化建设与发展.北京:北京园林学会,2016:119-124
[31] 刘凌云,范希峰,滕珂,等. 基于SSR标记的苔草种质遗传多样性分析[J]. 分子植物育种,2021,19(4):1250-1259
[32] Schmidt L,Schmid B,Oja T,et al. Genetic differentiation,phenotypic plasticity and adaptation in a hybridizing pair of a more common and a less common Carex species[J]. Alpine Botany,2018,128(2):149-167
[33] Ford B A,Starr J R,Thanh N T K,et al. Two Extraordinary New Pseudopetiolate Carex Species from Vietnam (sect. Hemiscaposae,Cyperaceae)[J]. Systematic Botany,2017,42(3):402-417
[34] 马万里,高艳春,王秀英. 苔草属硅细胞的形态特点及其分类学意义[J]. 内蒙古师大学报(自然科学汉文版),1996(3):63-67
[35] 张树仁,戴伦凯,梁松筠. 苔草属复序苔草亚属植物果皮的扫描电镜观察[J]. 广西植物,2000(2):185-188+204
[36] 马万里,高艳春. 苔草属果实表皮的超微结构及其在分类学上的意义[J]. 西北植物学报,1998,018(1):66-71
[37] Tanaka N. Chromosome studies in Cyperaceae[J]. Cytologia,1939,10(3):348-362
[38] Whitkus R. Chromosome counts of Carex section Ovales[J]. Botanical Gazette,1991,152(2):224-230
[39] Hipp A L. Nonuniform processes of chromosome evolution in sedges (Carex:Cyperaceae)[J]. Evolution,2007,61(9):2175-2194
[40] Escudero M,Maguilla E,Loureiro J,et al. Genome size stability despite high chromosome number variation in Carex gr. laevigata[J]. American Journal of Botany,2015,102(2):233-238
[41] Id H W,Kalinka A,J Koppman,et al. Chromosome numbers of Carex (Cyperaceae) and their taxonomic implications[J]. Plos One,2020,15(2):e0228353
[42] Bogucka-Kocka A,Szewczyk K,Janyszek M,et al. RP-HPLC analysis of phenolic acids of selected central european Carex L. (Cyperaceae) species and its implication for taxonomy[J]. Journal of Aoac International,2011,94(1):9-16
[43] King M G. Phylogeography and population genetics of Carex macrocephala,and the molecular evolution of Carex subgenus Vignea[D]. Washington:Washington state university,2007:2-5
[44] Hendrichs M,Oberwinkler F,Begerow D,et al. Carex,subgenus Carex (Cyperaceae)-A phylogenetic approach using ITS sequences[J]. Plant Systematics and Evolution,2004,246(1/2):89-107
[45] Jiménez-Mejías P,Hahn M,Lueders K,et al. Megaphylogenetic specimen-level approaches to the Carex (Cyperaceae) phylogeny using ITS,ETS,and matK sequences:implications for classification[J]. Systematic Botany,2016,41(3):500-518
[46] JP Pinzón,IM Ramírez-Morillo,C Germán,et al. Phylogenetics and evolution of the Tillandsia utriculata complex (Bromeliaceae,Tillandsioideae) inferred from three plastid DNA markers and the ETS of the nuclear ribosomal DNA[J]. Botanical Journal of the Linnean Society,2016,181(3):362-390
[47] Ning H,Wang W,Zheng C,et al. Genetic diversity analysis of sedges (Carex spp.) in Shandong,China based on inter-simple sequence repeat[J]. Biochemical Systematics & Ecology,2014,56:158-164
[48] Tripathi A M,Tyagi A,Kumar A,et al. The Internal Transcribed Spacer (ITS) Region and trnhH-psbA Are Suitable Candidate Loci for DNA Barcoding of Tropical Tree Species of India[J]. Plos One,2014,9(8):e57934
[49] Míguez M,Gehrke B,Maguilla E,et al. Carex sect. Rhynchocystis (Cyperaceae):a Miocene subtropical relict in the Western Palaearctic showing a dispersal-derived Rand Flora pattern[J]. Journal of Biogeography,2017,44(10):2211-2224
[50] 李海生. ISSR分子标记技术及其在植物遗传多样性分析中的应用[J]. 生物学通报,2004,39(2):19-21
[51] 王建波. ISSR分子标记及其在植物遗传学研究中的应用[J]. 遗传,2002,24(5):613-616
[52] Zhang Z,Xie W,Zhao Y,et al. EST-SSR marker development based on RNA-sequencing of E. sibiricus and its application for phylogenetic relationships analysis of seventeen Elymus species[J]. BMC Plant Biology,2019,19(1):235-235
[53] Pan L,Huang T,Yang Z,et al. EST-SSR marker characterization based on RNA-sequencing of Lolium multiflorum and cross transferability to related species[J]. Molecular Breeding,2018,38(6):1-12
[54] Freitag M,Zhou Y,Chen L,et al. De Novo assembly of Auricularia polytricha transcriptome using Illumina sequencing for gene discovery and SSR marker identification[J]. Plos One,2014,9(3):e91740
[55] Liu W,Zhou Y,Liao H,et al. Microsatellite primers in Carex moorcroftii (Cyperaceae),a dominant species of the steppe on the Qinghai-Tibetan Plateau[J]. American Journal of Botany,2011,98(12):e382-e384
[56] Li M N,Long R C,Feng Z R,et al. Transcriptome analysis of salt-responsive genes and SSR marker exploration in Carex rigescens using RNA-seq[J]. 农业科学学报:英文版,2018,17(1):184-196
[57] Ohsako T,Yamane K. Isolation and characterization of polymorphic microsatellite loci in Asiatic sand sedge,Carex kobomugi Ohwi (Cyperaceae)[J]. Molecular Ecology Notes,2007,7(6):1023-1025
[58] King M G,Roalson E H. Isolation and characterization of 11 microsatellite loci from Carex macrocephala (Cyperaceae)[J]. Conservation Genetics,2009,10(3):531-533
[59] M'baya J B,Hoffmann A A. Genetic Structure of Carex Species from the Australian Alpine Region along Elevation Gradients:Patterns of Reproduction and Gene Flow[J]. International Journal of Plant Sciences,2013,174(2):189-199
[60] Nagasawa K,Setoguchi H,Maki M,et al. Development and characterization of EST-SSR markers for Carex angustisquama (Cyperaceae),an extremophyte in solfatara fields[J]. Applications in Plant Sciences,2018,6(10):e01185
[61] Arroyo J M,Escudero M,Jordano P. Isolation of 91 polymorphic microsatellite loci in the western Mediterranean endemic Carex helodes (Cyperaceae)[J]. Applications in Plant Sciences,2016,4(1):1500085
[62] Liu L,Fan X,Tan P, et al. The development of SSR markers based on RNA-sequencing and its validation between and within Carex L. species[J]. BMC Plant Biology,2021,21(1):02792
[63] Starr J R,Janzen F H,Ford B A. Three new,early diverging Carex (Cariceae,Cyperaceae) lineages from East and Southeast Asia with important evolutionary and biogeographic implications[J]. Molecular Phylogenetics and Evolution,2015,88:105-120
[64] Vellend M,Lechowicz M J,Waterway M J. Environmental distribution of four Carex species (Cyperaceae) in an old rowth forest[J]. America Joural of Botany,2000,87(10):1507-1516
[65] Benítez-Benítez C,Escudero M,Rodríguez-Sánchez F,et al. Pliocene-Pleistocene ecological niche evolution shapes the phylogeography of a Mediterranean plant group[J]. Molecular Ecology,2018,27(7):1696-1713
[66] 马万里,韩烈保,罗菊春. 草坪植物的新资源-苔草属植物[J]. 草业科学,2001,18(2):43-45
[67] 王俊强,吕会刚,方唯,等. 苔草属种质资源的研究与应用[J]. 北京园林,2006(2):38-40
[68] 梁芳,董爱香,马燕. 北京野生苔草属植物资源调查及观赏性状评价[J]. 草业科学,2012,29(5):710-716
[69] 杨泽新,蔡维湘. 灌丛草地放牧山羊的牧草适口性与嗜食性及山羊采食率研究[J]. 草业科学,1995(2):17-21,4
[70] 吉文丽,朱清科,李卫忠,等. 苔草植物分类、利用及物质循环研究进展[J]. 草业科学,2006,23(2):15-21
[71] 马建章,杜永欣. 马鹿和狍饲料植物的营养质量[J]. 生态学报,1996,16(3):269-275
[72] 萧运峰,陈茂庆. 野生草坪植物-寸草苔的研究[J]. 生物学杂志,1996(4):15-17
[73] 张少华,孟红. 翼果苔草提取物体外抗病毒的实验研究[J]. 山东中医杂志,2010(4):48-49
[74] 倪培忠,王俐,高元清. 白颖苔草片剂(颗粒剂)的研制[J]. 时珍国医国药,2004(4):223-224
[75] Arraki K,Totoson P,Decendit A,et al. Cyperaceae Species Are Potential Sources of Natural Mammalian Arginase Inhibitors with Positive Effects on Vascular Function[J]. Journal of Natural Products,2017,80(9):2432-2438
[76] Fang W P,Meinhardt L W,Tan H W,et al. Varietal identification of tea (Camellia sinensis) using nanofluidic array of single nucleotide polymorphism (SNP) markers[J]. Horticulture Research,2014,1(1):14035
[77] Shen C,Du H,Chen Z,et al. The chromosome-level genome sequence of the Autotetraploid Alfalfa and resequencing of core germplasms provide genomic resources for Alfalfa research[J]. Molecular Plant,2020,13(9):1250-1261
[78] Huang L,Feng G,Yan H,et al. Genome assembly provides insights into the genome evolution and flowering regulation of orchard grass[J]. Plant Biotechnology Journal,2019,18(2):373-388
[79] Yan Q,Wu F,Xu P,et al. The elephant grass (Cenchrus purpureus) genome provides insights into anthocyanidin accumulation and fast growth[J]. Molecular ecology resources,2020,21(2):526-542
[80] Can M,Wei W,Zi H,et al. Genome sequence of Kobresia littledalei, the first chromosome-level genome in the family Cyperaceae[J]. Scientific Data,2020,7(1):175-175
[81] Zhao X,Zhang J,Zhang Z,et al. Hybrid identification and genetic variation of Elymus sibiricus hybrid populations using EST-SSR markers[J]. Hereditas,2017,154(1):15-15
[82] 闵学阳,刘文献,张正社,等. 苜蓿DUS测试标准品种SSR分子标记指纹图谱的构建[J]. 草业学报,2017,26(11):47-56
[83] 魏臻武,符昕,耿小丽,等. 苜蓿遗传多样性和亲缘关系的SSR和ISSR分析[J]. 草地学报,2007(2):118-123
[84] 麻丽颖,孔德仓,刘华波,等. 36份枣品种SSR指纹图谱的构建[J]. 园艺学报,2012,39(4):647-654
[85] 李怀志,张峻,李翔,等. 应用SRAP标记对茄子品种进行遗传多样性分析与指纹图谱构建[J]. 南京农业大学学报,2011(4):22-26
[86] 王杰,高秋,杨国锋,等. 国审苏丹草和高丹草品种SSR指纹图谱构建及遗传多样性分析[J]. 草地学报,2016,24(1):156-164
[87] 梁芳,李子敬,董爱香,等. 涝峪苔草新品种‘银妃’[J]. 园艺学报,2019,46(S2):178-179

苔草属植物遗传多样性研究进展

Advances in Development of Genetic Diversity of Carex L.

PDF

可视化

摘要/Abstract

引用本文

使用本文

参考文献

相关文章 15

编辑推荐

Metrics

本文评价

[1]	马骢毓, 韩重阳, 马赛男, 李旭旭, 蔡家邦, 汪阳, 张新全, 聂刚. 基于SSR分子标记的13个白三叶(Trifolium repens L.)品种指纹图谱构建[J]. 草地学报, 2021, 29(9): 1892-1899.
[2]	罗铭欣, 刘凤民, 陈纪言, 崔均涛, 张伟丽. ⁶⁰Coγ辐射柱花草M₃代的农艺性状及遗传多样性分析[J]. 草地学报, 2021, 29(9): 1992-2000.
[3]	梁小玉, 季杨, 胡远彬, 易军, 白史且, 张靓, 张新全. 菊苣EST-SSR分子标记开发及通用性分析[J]. 草地学报, 2021, 29(9): 2081-2090.
[4]	陈志祥, 罗小燕, 李拴林, 吴如月, 王文强, 丁西朋. 基于SSR标记的木豆种质资源遗传多样性与群体结构分析[J]. 草地学报, 2021, 29(5): 904-911.
[5]	梁国玲, 刘文辉, 马祥. 590份皮燕麦种质资源穗部性状遗传多样性分析[J]. 草地学报, 2021, 29(3): 495-503.
[6]	王洪斌, 张煜坤, 张大才. 青藏苔草形态特征及生物量分配沿水分梯度的变化[J]. 草地学报, 2021, 29(3): 522-530.
[7]	张琦, 魏臻武, 闫天芳, 耿小丽. 燕麦种质资源农艺性状遗传多样性的鉴定评价[J]. 草地学报, 2021, 29(2): 309-316.
[8]	范希峰, 武菊英, 滕文军, 韩朝, 温海峰, 岳跃森, 滕珂, 张辉. 基质厚度对青绿苔草生长和草皮质量的影响[J]. 草地学报, 2021, 29(2): 383-387.
[9]	安明珠, 韩博, 姜华, 段新慧, 文亦芾, 周凯. 鸭茅物种起源与系统发育分析研究进展[J]. 草地学报, 2021, 29(12): 2637-2644.
[10]	王建丽, 刘杰淋, 朱瑞芬, 钟鹏, 尤佳, 邸桂俐, 韩微波, 申忠宝. 28份籽粒苋种质资源的主要农艺性状遗传多样性分析[J]. 草地学报, 2020, 28(4): 1050-1059.
[11]	杨艳婷, 石凤翎, 徐舶, 张雨桐, 闫伟. 苜蓿品种鉴定及其遗传多样性分析[J]. 草地学报, 2020, 28(4): 1060-1067.
[12]	麻冬梅, 张喜斌, 黄婷, 王文静, 赵丽娟, 马巧利. 利用SSR标记对不同耐盐紫花苜蓿遗传多样性分析[J]. 草地学报, 2019, 27(6): 1477-1485.
[13]	刘亚令, 耿雅萍, 解潇冬, 王芳, 张鹏飞. 基于SSR分子标记的药用黄芪遗传多样性与遗传结构分析[J]. 草地学报, 2019, 27(5): 1154-1162.
[14]	邓振山, 李买平, 郝雷, 陈凯凯, 李静, 刘玉珍, 张宝宝, 齐向英. 巨菌草内生细菌多样性及其促生特性[J]. 草地学报, 2019, 27(5): 1213-1221.
[15]	张咏梅, 白小明, 田彥锋, 龚良建. 4种观赏草叶片解剖结构的观察及其对环境的适应性分析[J]. 草地学报, 2019, 27(5): 1377-1383.