Studies of SCAR Markers Linked to Pollen Sterility Gene in Stylosanthes guianensis
HUANG Chun-qiong, ZHANG Zi-xiong, WANG Wen-qiang, LIU Guo-dao
Tropical Crops Genetic Resources Institute/Key Laboratory of Crop Gene Resources and Germplasm Enhancement in Southern China, Ministry of Agriculture and Rural Affairs, Haikou, Hainan Province 571101, China
Abstract:In the present study,the pollen fertility and sterility gene pool were constructed using BC1F1 individuals which got through continuous cross from S. guianens 1979 (pollen sterility) and S. guianensis ‘Reyan No.2’ (pollen fertility,recurrent parent) using ISSR technique and BAS (Bulked Segregate Analysis) method. The results showed that 11 ISSR (Inter-simple Sequence Repeat) specific markers of sterile gene pool were screened out using 100 ISSR primers. After individuals of population test,only 8 markers could be amplified in the pollen sterility individuals,which showed 8 markers existed certain linkage relationship with pollen sterility gene. Thus,the 8 markers were collected and sequenced to synthesize 8 SCAR pairs of primers respectively to amplify the individuals of the BC1F1 progeny,the results showed that the 8 markers could only be amplified in the pollen sterility individuals,indicating the 8 ISSR markers have been successfully converted into 8 SCAR markers which linked to pollen sterility gene. The research results provide the new theoretical basis for screening specific SCAR markers and establish stable male sterile line of S. guianensis, and lay the foundation for S.guianensis cross breeding.
Stace H M. Breeding systems in Stylosanthes.I. Observations of out crossing in S. scabra at an alcohol dehydrogenase locus[J]. Australian Journal of Agricultural Research,1982,33(1):87-96
Paran I,Michelmore R W. Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce[J]. Theoretical and Applied Genetics,1993,85(8):985-993
[7]
Zhang M,Chen W Q,Liu D,et al. Identification of a specific scar marker for detection of Tilletia foetida (Wall) Liro pathogen of wheat[J]. Genetika,2012,48(6):776-780
[8]
Korekar G,Sharma P K,Kumar R,et al. Identification and validation of sex-linked SCAR markers in dioecious Hippophae rhamnoides L. (Elaeagnaceae)[J]. Biotechnology Letters,2012,34(5):973-738
[9]
Mastan S C,Sudheer P D,Rahman H,et al. Development of SCAR marker specific to non-toxic Jatropha curcas L. and designing a novel multiplexing PCR along with nrDNA ITS primers to circumvent the false negative detection[J]. Molecular Biotechnology,2012,50(1):57-61
[10]
Huang C Q,Liu G D,Bai CJ,et al. Application of SRAP markers in the identifification of Stylosanthes guianensis hybrids[J]. Molecular Biology Reports,2014,41(9):5923-5929
[11]
Huang C Q,Liu G D,Bai C J. Polymorphism analysis in identification of genetic variation and relationships among Stylosanthes species[J]. 3 Biotech,2017,7(1):1-10
Jiang C S,Ma X R,Zhou D M,et al. AFLP analysis of genetic variability among Stylosanthes guianensis accessions resistant and susceptible to the stylo anthracnose[J]. Plant Breed,2005,124(6):595-598
Michelmore R W. Identification of marker linked to disease-resistance gene by bulked segregate analysis:a rapid method detect marker in specific genomic regions by using segregating populations[J].Proceedings of the National Academy of Sciences USA,1991,88(21):9828-9832
Yi B,Chen Y N,Lei S L,et al. Fine mapping of the recessive genic male-sterile gene (Bnms1) in Brassica napus L[J]. Theoretical and Applied Genetics,2006,113(4):643-650
[34]
Huang Z,Chen Y F,Yi B,et al. Fine mapping of the recessive genic male sterility gene (Bnms3) in Brassica napus L[J]. Theoretical and Applied Genetics,2007,115(1):113-118
[35]
Lei S,Yao X,Yi B,et al. Towards map-based cloning:fine mapping of a recessive genic male-sterile gene (Bn Ms2) in Brassica napus L. and syntenic region identification based on the Arabidopsis thaliana genome sequences[J]. Theoretical and Applied Genetics,2007,115(5):643-651
Ke L P,Sun Y Q,Hong D F,et al. Identification of AFLP markers linked to one recessive genic male sterility gene in oilseed rape,Brassica napus[J]. Plant Breeding,2005,124(4):367-370